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yhcY [2018-09-26 17:04:13]
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yhcY [2018-09-26 17:04:13]

two-component sensor kinase
locus
BSU09320
pI
6.64
mw
41.83 kDa
protein length
379 aa Sequence Blast
gene length
1137 bp Sequence Blast
function
unknown
product
two-component sensor kinase
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.4|Protein modification] → [category|SW 3.3.4.2|Protein kinases]
  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.2|Control of two-component response regulators] → [category|SW 3.4.2.2.1|Two-component sensor kinase]
  • [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.4|Phosphorylation on a His residue]

    • Gene

    Coordinates
    1,008,668 → 1,009,807

    The protein

    Catalyzed reaction/ biological activity

  • autophosphorylation, phosphorylation of [protein|DD799ED3EB79457C27ED30C7B4DBBC2C8F962191|YhcZ] in a Asp residue

    • Modification

  • autophosphorylation on a His residue

    • [SW|Localization]

  • cytoplasm (Homogeneous) [Pubmed|16479537]

    • Expression and Regulation

    Operons

    genes
    [gene|8D570AEE5D78A9A3CDBB1F457630BAF5DB59BCFD|yhcY]-[gene|DD799ED3EB79457C27ED30C7B4DBBC2C8F962191|yhcZ]-[gene|345EC248C0ADF48B0C25B175241AAE982E0E9B78|yhdA]
    description
    [Pubmed|16816187]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|16816187], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • regulatory mechanism

  • [protein|49E70A20CC05DBE485953C0AE34E634EFB33C3B2|LiaR]: activation, [Pubmed|16816187], in [regulon|49E70A20CC05DBE485953C0AE34E634EFB33C3B2|LiaR regulon]
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    Biological materials

    Mutant

  • MGNA-A729 (yhcY::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/729 NBRP B. subtilis, Japan]
  • BKE09320 (Δ[gene|8D570AEE5D78A9A3CDBB1F457630BAF5DB59BCFD|yhcY]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09320 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGTTTCTCACTCCGGCAT, downstream forward: _UP4_AAAAGCCGAAAAGGAGGGGC
  • BKK09320 (Δ[gene|8D570AEE5D78A9A3CDBB1F457630BAF5DB59BCFD|yhcY]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09320 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGTTTCTCACTCCGGCAT, downstream forward: _UP4_AAAAGCCGAAAAGGAGGGGC

    • References

  • 10094672,20639339,16816187,16479537